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-rw-r--r--SunSpider/tests/sunspider-0.9.1/string-fasta.js85
1 files changed, 0 insertions, 85 deletions
diff --git a/SunSpider/tests/sunspider-0.9.1/string-fasta.js b/SunSpider/tests/sunspider-0.9.1/string-fasta.js
deleted file mode 100644
index 14a81f3..0000000
--- a/SunSpider/tests/sunspider-0.9.1/string-fasta.js
+++ /dev/null
@@ -1,85 +0,0 @@
-// The Great Computer Language Shootout
-// http://shootout.alioth.debian.org
-//
-// Contributed by Ian Osgood
-
-var last = 42, A = 3877, C = 29573, M = 139968;
-
-function rand(max) {
- last = (last * A + C) % M;
- return max * last / M;
-}
-
-var ALU =
- "GGCCGGGCGCGGTGGCTCACGCCTGTAATCCCAGCACTTTGG" +
- "GAGGCCGAGGCGGGCGGATCACCTGAGGTCAGGAGTTCGAGA" +
- "CCAGCCTGGCCAACATGGTGAAACCCCGTCTCTACTAAAAAT" +
- "ACAAAAATTAGCCGGGCGTGGTGGCGCGCGCCTGTAATCCCA" +
- "GCTACTCGGGAGGCTGAGGCAGGAGAATCGCTTGAACCCGGG" +
- "AGGCGGAGGTTGCAGTGAGCCGAGATCGCGCCACTGCACTCC" +
- "AGCCTGGGCGACAGAGCGAGACTCCGTCTCAAAAA";
-
-var IUB = {
- a:0.27, c:0.12, g:0.12, t:0.27,
- B:0.02, D:0.02, H:0.02, K:0.02,
- M:0.02, N:0.02, R:0.02, S:0.02,
- V:0.02, W:0.02, Y:0.02
-}
-
-var HomoSap = {
- a: 0.3029549426680,
- c: 0.1979883004921,
- g: 0.1975473066391,
- t: 0.3015094502008
-}
-
-function makeCumulative(table) {
- var last = null;
- for (var c in table) {
- if (last) table[c] += table[last];
- last = c;
- }
-}
-
-function fastaRepeat(n, seq) {
- var seqi = 0, lenOut = 60;
- while (n>0) {
- if (n<lenOut) lenOut = n;
- if (seqi + lenOut < seq.length) {
- ret = seq.substring(seqi, seqi+lenOut);
- seqi += lenOut;
- } else {
- var s = seq.substring(seqi);
- seqi = lenOut - s.length;
- ret = s + seq.substring(0, seqi);
- }
- n -= lenOut;
- }
-}
-
-function fastaRandom(n, table) {
- var line = new Array(60);
- makeCumulative(table);
- while (n>0) {
- if (n<line.length) line = new Array(n);
- for (var i=0; i<line.length; i++) {
- var r = rand(1);
- for (var c in table) {
- if (r < table[c]) {
- line[i] = c;
- break;
- }
- }
- }
- ret = line.join('');
- n -= line.length;
- }
-}
-
-var ret;
-
-var count = 7;
-ret = fastaRepeat(2*count*100000, ALU);
-ret = fastaRandom(3*count*1000, IUB);
-ret = fastaRandom(5*count*1000, HomoSap);
-